Information for 6-TAGGTGGCGC (Motif 24)

G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C
Reverse Opposite:
A C T G A G T C A C T G A G T C A G T C G T C A A G T C A G T C A C G T C T G A
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.850
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif102.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets48.1 +/- 18.0bp
Average Position of motif in Background49.7 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TAGGTGGCGC---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TAGGTGGCGC-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.69
Offset:-7
Orientation:forward strand
Alignment:-------TAGGTGGCGC--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAGGTGGCGC
-AGGTGTCA-
 G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TAGGTGGCGC---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTGGCGC
NNCAGGTGNN--
 A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAGGTGGCGC----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TAGGTGGCGC-
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAGGTGGCGC
SDGCAGGTGCNS-
 A C G T A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGGTGGCGC
AACAGGTGT---
 A C G T A C G T G A C T C G T A A C T G C T A G A C G T A C T G T C A G A G T C C T A G G T A C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T