Information for 5-TTGACAACGT (Motif 23)

A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
Reverse Opposite:
T C G A A G T C C T A G A C G T C G A T T A C G A C G T A G T C T C G A T C G A
p-value:1e-9
log p-value:-2.290e+01
Information Content per bp:1.672
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif515.9
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets50.1 +/- 28.4bp
Average Position of motif in Background50.0 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGACAACGT
TTGACAGG--
 A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGACAACGT
TTGACAG---
 A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGACAACGT
RHTGWCAR---
 A C G T A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTGACAACGT
TTGACAGC--
 A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGACAACGT
ARNTGACA----
 A C G T A C G T A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGACAACGT
TTGCCAAG--
 A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTGACAACGT---
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGACAACGT
NNTTGGCANN--
 A C G T A C G T A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGACAACGT------
TNAACGACGTCGNCCA
 A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGACAACGT
VGCTGWCAVB--
 A C G T A C G T A G C T A G C T A C T G T G C A A T G C C G T A T G C A G A T C T C A G A G C T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T