Information for 5-CTGGGCTCCATCA (Motif 12)

G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C G T A C T G A C T G C G T A A C T G A T G C A G T C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 15.4bp
Average Position of motif in Background71.3 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CTGGGCTCCATCA--
---GGCTCYAKCAYC
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGCTCCATCA
GYCTGGYYTNTGTCA
 A C G T A C G T G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGGGCTCCATCA
GTGGGCCCCA---
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGGCTCCATCA
--GTCCGCCATTA
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGGCTCCATCA-
--GYCATCMATCAT
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A A C G T
A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGGGCTCCATCA
----GCTCCG---
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCTCCATCA
WDNCTGGGCA------
 A C G T A C G T A C G T G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTGGGCTCCATCA-
----ATTGCATCAT
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTGGGCTCCATCA-
----ATTGCATCAK
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGGCTCCATCA
-TGACCTTGAT--
 G T A C A C G T A C T G C T A G A T C G A G T C A C G T A G T C A G T C C G T A A C G T A T G C C G T A
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T