Information for 6-SCTGBCTSCDGCCHSM (Motif 9)

A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
Reverse Opposite:
A C T G T A G C C A G T A C T G A C T G T A G C G T C A C T A G T A C G C G T A A C T G T A C G A T G C G T C A A C T G T A G C
p-value:1e-11
log p-value:-2.751e+01
Information Content per bp:1.561
Number of Target Sequences with motif144.0
Percentage of Target Sequences with motif20.40%
Number of Background Sequences with motif5061.6
Percentage of Background Sequences with motif11.20%
Average Position of motif in Targets50.1 +/- 24.9bp
Average Position of motif in Background49.7 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM
SCTGTCARCACC----
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-SCTGBCTSCDGCCHSM
VGCTGWCAVB-------
 A C G T A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM
----GCTCCGCCCMCY
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM-
--TGCCTGCGYCMCCTT
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---SCTGBCTSCDGCCHSM
CTGTCTGTCACCT------
 A C G T A C G T A C G T A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM
--TGACACCTGTCA--
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
A C G T A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:SCTGBCTSCDGCCHSM-
--NRGCCCCRCCCHBNN
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SCTGBCTSCDGCCHSM
TGTCTGDCACCT------
 A C G T A C G T A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM
--TGACAGCTGTCA--
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:SCTGBCTSCDGCCHSM
--TGACACCTGTCA--
 A T C G G T A C A C G T T A C G A T G C A G T C G C A T A T G C G A T C C A G T A T C G T G A C G T A C G T C A A T C G T G A C
A C G T A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T