Information for 8-CAACMTTGCC (Motif 31)

T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C G T C A T C G A A C G T C T A G C G A T A C G T A C T G
p-value:1e-8
log p-value:-1.858e+01
Information Content per bp:1.692
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif9.63%
Number of Background Sequences with motif2052.3
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets50.2 +/- 25.1bp
Average Position of motif in Background49.5 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAACMTTGCC----
-----CTGCCCGCA
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAACMTTGCC--
-NNACTTGCCTT
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAACMTTGCC-
ACTACAATTCCC
 A C G T T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAACMTTGCC---
-----TTGCCAAG
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAACMTTGCC----
-----ATGCCCACC
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAACMTTGCC---
----CGTGCCAAG
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAACMTTGCC--
------TGCCAA
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAACMTTGCC----
----GGTGCCAAGT
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAACMTTGCC---
---NRYTTCCGGH
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAACMTTGCC----
-----ATGCCAACC
 T G A C T G C A G C T A A G T C T G C A A G C T C A G T T A C G A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C