Information for 7-ACTTCACTAG (Motif 28)

C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
Reverse Opposite:
A G T C C A G T C T G A A C T G A C G T A C T G G T C A C G T A A C T G C G A T
p-value:1e-8
log p-value:-1.954e+01
Information Content per bp:1.876
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif32.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.0 +/- 28.6bp
Average Position of motif in Background50.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTTCACTAG-----
GANGTTAACTAGTTTNN
 A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACTTCACTAG-
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTCACTAG-
-GTTAACTAGN
 C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTTCACTAG
GCTTCC----
 C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTTCACTAG
CCACTTGAA---
 A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTTCACTAG
ACGTCA----
 C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTTCACTAG
TACGTCAT---
 A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTTCACTAG
ACCACTTGAA---
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTTCACTAG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTTCACTAG
RSCACTYRAG---
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A G T C C G T A A G T C A G C T G T C A A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T