Information for 6-TGCGTCCATC (Motif 25)

A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A C T G C T G A A G T C A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.948
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 25.7bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB7A/MA0750.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGCGTCCATC--
GGCGACCACCGA
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCGTCCATC---
-GCNGCCATCTTG
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCGTCCATC---
-GCCGCCATCTTG
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCGTCCATC--
GYCATCMATCAT
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

ZBTB7C/MA0695.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCGTCCATC---
-GCGACCACCGAA
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCGTCCATC---
-GCGACCACCGAA
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCGTCCATC--------
-TCACCCATCAATAAACA
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCGTCCATC
TTGCGTGCVA-
 A C G T A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCGTCCATC---
-GCGACCACACTG
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGCGTCCATC---
---GGCCATTAAC
 A C G T A C T G A G T C C T A G A G C T A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C