Information for 2-SGKGGCKGCAGGSMGR (Motif 5)

A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
Reverse Opposite:
G A T C T A G C A C G T A T G C A G T C A G T C A C G T A T C G A G T C G T A C T C A G G T A C G T A C G T A C A G T C T A G C
p-value:1e-13
log p-value:-3.142e+01
Information Content per bp:1.635
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif6.04%
Number of Background Sequences with motif694.9
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets42.4 +/- 23.3bp
Average Position of motif in Background48.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
--GGGCGGGAAGG---
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-SGKGGCKGCAGGSMGR
AAGGKGRCGCAGGCA--
 A C G T A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
--GGGCGGGAAGG---
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
-GGGGCCCAAGGGGG-
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
---CACAGCAGGGGG-
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:SGKGGCKGCAGGSMGR-
--DCHCAGCAGGRGGCC
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
---GGCGGGAARN---
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:SGKGGCKGCAGGSMGR-
--NCGCAGCGGGGGGTC
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SGKGGCKGCAGGSMGR
BTKGGCGGGAAA----
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:SGKGGCKGCAGGSMGR-
--NCNCAGCGGGGGGTC
 A T C G T C A G A C T G A C T G C A T G A G T C C A T G C T A G A T G C C G T A C T A G T C A G T A C G T G C A A C T G C T A G A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C