Information for 13-CTCCTTAGTC (Motif 28)

A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C C A G T C G T A C T G A A C T G A T C G G T C A A T C G
p-value:1e-7
log p-value:-1.629e+01
Information Content per bp:1.813
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets37.0 +/- 20.1bp
Average Position of motif in Background44.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTTAGTC-----
ANTCCTTTGTCTNNNN
 A C G T A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC
--CCTTTGTT
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC--
--CCTTTGTTTT
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC--
--YCTTTGTTCC
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC--
--CCWTTGTYYB
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC
--CCWTTGTY
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTCCTTAGTC--
--CCATTGTTTT
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCTTAGTC-----
NTGCTGAGTCATCCN
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCTTAGTC-----
GAGCCCTTGTCCCTAA
 A C G T A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nfe2l2/MA0150.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCTTAGTC------
-TGCTGAGTCATNNTG
 A T G C A C G T A T G C A G T C A G C T A C G T G T C A C T A G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G