Information for 13-GMTGTGGGRMTTK (Motif 18)

C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A C A T G A G T C A G T C A G T C A G T C C G T A G A T C G T C A C A G T A G T C
p-value:1e-8
log p-value:-2.067e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.7 +/- 29.7bp
Average Position of motif in Background47.7 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GMTGTGGGRMTTK
ACAGGATGTGGT-----
 A C G T A C G T A C G T A C G T C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GMTGTGGGRMTTK
NNHTGTGGTTWN--
 A C G T C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GMTGTGGGRMTTK--
-----GGGGATTTCC
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GMTGTGGGRMTTK--
-----GGGAATTTCC
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GMTGTGGGRMTTK--
-----GGGAATTTCC
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GMTGTGGGRMTTK---
----NGGGGATTTCCC
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GMTGTGGGRMTTK
GCTGTGGTTT---
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GMTGTGGGRMTTK--
----TGTGGATTNNN
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GMTGTGGGRMTTK
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GMTGTGGGRMTTK
--CSTGGGAAAD-
 C T A G G T A C A C G T C T A G A C G T A C T G A C T G A C T G C T A G G T A C A C G T A C G T A C T G
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T