Information for 7-TGCTATCTAATGG (Motif 8)

A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C G T A C G T C G T A A C T G C T G A C A G T C T G A A C T G A G T C C G T A
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 24.1bp
Average Position of motif in Background46.5 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGCTATCTAATGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATCTAATGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TGCTATCTAATGG-
------CTAATKGV
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGCTATCTAATGG-
------NTAATTGN
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTATCTAATGG
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCTATCTAATGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGCTATCTAATGG--
------CTAATCGNT
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTATCTAATGG--
TGCTGAGTCATNNTG
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGCTATCTAATGG---
------NTAATKGTTT
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGCTATCTAATGG--
-----GTTAATGGCC
 A C G T C T A G G T A C A G C T G C T A A G C T A G T C A C G T T G C A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C