Information for 2-GGAGCACGTG (Motif 2)

C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G
Reverse Opposite:
A T G C G T C A A G T C T C A G A G C T A C T G A G T C G A C T G A T C G A T C
p-value:1e-29
log p-value:-6.863e+01
Information Content per bp:1.651
Number of Target Sequences with motif157.0
Percentage of Target Sequences with motif18.49%
Number of Background Sequences with motif3108.7
Percentage of Background Sequences with motif6.72%
Average Position of motif in Targets54.5 +/- 19.2bp
Average Position of motif in Background50.3 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GGAGCACGTG--
NNACCACGTGGT
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T A C G T
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

MNT/MA0825.1/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:forward strand
Alignment:GGAGCACGTG--
--ACCACGTGCC
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T A C G T
A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:GGAGCACGTG
--NVCACGTG
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:GGAGCACGTG--
--NNCACGTGGT
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T A C G T
A C G T A C G T C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.94
Offset:2
Orientation:forward strand
Alignment:GGAGCACGTG
--ACCACGTG
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G
A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:GGAGCACGTG--
----CACGTGNC
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Id2/MA0617.1/Jaspar

Match Rank:7
Score:0.93
Offset:3
Orientation:forward strand
Alignment:GGAGCACGTG-
---GCACGTGA
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T
A C G T A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:GGAGCACGTG-
-NNCCACGTGG
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:GGAGCACGTG-
-NGKCACGTGM
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T
A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.93
Offset:4
Orientation:reverse strand
Alignment:GGAGCACGTG--
----CACGTGDC
 C T A G C T A G C T G A T C A G G T A C C T G A A G T C T C A G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C