Information for 11-CTGTCAGTAA (Motif 17)

G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
Reverse Opposite:
A C G T A G C T G T C A A G T C C G A T A T C G C G T A A T G C C G T A A C T G
p-value:1e-10
log p-value:-2.400e+01
Information Content per bp:1.855
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif92.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets54.9 +/- 24.4bp
Average Position of motif in Background54.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CTGTCAGTAA
GSCTGTCACTCA
 A C G T A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGTCAGTAA
NTGTCAN---
 G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTGTCAGTAA-
NCTGTCAATCAN
 A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGTAA
GCTGTCAA---
 A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CTGTCAGTAA
VGCTGWCAVB--
 A C G T A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGTCAGTAA-
SCTGTCAVTCAV
 A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCAGTAA-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGTAA
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGTAA
CCTGTCAA---
 A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGTAA
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T C G A C G T A T G C C G T A C T A G A C G T T C G A G T C A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T