Information for 11-CAGTCAAACC (Motif 13)

A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C
Reverse Opposite:
A C T G A C T G A G C T A G C T A C G T A C T G T C G A G T A C A C G T T A C G
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.837
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif211.6
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets51.2 +/- 27.6bp
Average Position of motif in Background45.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAAACC
AAAAGTCAA---
 A C G T A C G T A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGTCAAACC-
---TCACACCT
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGTCAAACC-
-ACTGAAACCA
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGTCAAACC-
---TCACACCT
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CAGTCAAACC-
---TCACACCT
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGTCAAACC--
CNGTCACGCCAC
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAGTCAAACC
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGTCAAACC
CCAATCAA---
 A C G T A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCAAACC
BCAGACWA---
 A C G T A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAGTCAAACC-
---TCACACCT
 A T G C C G T A A C T G A G C T G T A C C G T A T C G A C T G A G T A C A G T C A C G T
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T