Information for 2-CTTGTGGCCACHAGGN (Motif 3)

A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
Reverse Opposite:
T A G C A G T C A G T C A G C T C T G A C A T G C G A T C T A G C T A G G T A C A G T C C G T A G A T C G T C A T C G A C T A G
p-value:1e-19
log p-value:-4.381e+01
Information Content per bp:1.697
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.1 +/- 25.9bp
Average Position of motif in Background48.8 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTTGTGGCCACHAGGN--------
----TGGCCACCAGGTGGCACTNT
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTTGTGGCCACHAGGN-------
----TGGCCACCAGGGGGCGCTA
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTTGTGGCCACHAGGN
------GTCACATGAY
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTTGTGGCCACHAGGN
-----GGTCACATGAC
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTTGTGGCCACHAGGN
-----GGTCACGTGGC
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTTGTGGCCACHAGGN
WCATTTTGKCCTCYT---
 A C G T A C G T A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTTGTGGCCACHAGGN
GTCTGTGGTTT------
 A C G T A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTGTGGCCACHAGGN
NNHTGTGGTTWN-----
 A C G T A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTTGTGGCCACHAGGN-
CATAAGACCACCATTAC
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Mitf/MA0620.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CTTGTGGCCACHAGGN
-----GGTCACGTGG-
 A G T C A G C T C A G T C A T G C G A T C T A G C A T G A G T C A G T C C G T A G A T C G A C T T C G A C T A G T C A G A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T