Information for 5-CCCGCCGGAGCGGAGA (Motif 17)

A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A G T C A C T G A T G C A G C T A G T C A G T C A C T G A C T G A G T C A C T G A C T G A T C G
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.4 +/- 12.4bp
Average Position of motif in Background51.3 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA
-----CGGAGC-----
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA
--GGCGGGGGCGGGGG
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA
ANTGCGGGGGCGGN--
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA-
-----GGGGGCGGGGCC
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGCCGGAGCGGAGA
AGCGCGCC----------
 A C G T A C G T A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCGCCGGAGCGGAGA
CCCCCCCGGGGGGGT--
 A C G T A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA
-----GGGGGCGGGGC
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA--
-NNTNNGGGGCGGNGNGN
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A A C G T A C G T
A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCGCCGGAGCGGAGA-
-NNTNAGGGGCGGNNNN
 A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A A C G T
A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCCGCCGGAGCGGAGA
CCCCCCCGGGGGGGT--
 A C G T A T G C T A G C A G T C A C T G A G T C A G T C A C T G A C T G C T G A A T C G A G T C A C T G A C T G C T G A A C T G C G T A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T