Information for 18-GTKTAMTTAAGAT (Motif 21)

A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T T G A C C A G T A G C T G T C A T C G A C A T G A G C T C G T A G T C A G T C A A G T C
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.718
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.9 +/- 18.5bp
Average Position of motif in Background19.9 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTKTAMTTAAGAT--
GGGTTTAATTAAAATTC
 A C G T A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0072.1_Hoxc8/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTKTAMTTAAGAT
TTGGGGTAATTAACGT
 A C G T A C G T A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTKTAMTTAAGAT
--NTAATTAATAT
 A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTKTAMTTAAGAT--
CGAATTAATTAAGAAAC
 A C G T A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T A C G T A C G T
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C

NFIL3/MA0025.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTKTAMTTAAGAT
--TTATGTAACAT
 A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTKTAMTTAAGAT
TGTTTACTTT----
 A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTKTAMTTAAGAT
TGTTTATTT-----
 A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTKTAMTTAAGAT
TGTTTACTTT----
 A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTKTAMTTAAGAT
NTGTTTAYATWW---
 A C G T A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTKTAMTTAAGAT--
CGAATTAATTAAAAACC
 A C G T A C G T A C T G A C G T A C G T C G A T C T G A G T A C A G C T A C G T C T G A G T C A A C T G C G T A A C G T A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C