Information for 9-GATCCTGGCCTKT (Motif 13)

A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
Reverse Opposite:
G T C A G T A C C G T A C T A G A C T G G T A C G T A C C G T A A C T G C T A G C G T A C G A T A G T C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.823
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets35.2 +/- 28.5bp
Average Position of motif in Background57.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GATCCTGGCCTKT
-NNACTTGCCTT-
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGCCTKT
ACATCCTGNT----
 A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GATCCTGGCCTKT-
----CTGACCTTTG
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCCTKT
---BNTGDCCTTG
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATCCTGGCCTKT
-GGTCTGGCAT--
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCCTKT-----
---GCTGACCTTGAACTN
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCCTKT
---CNAGGCCT--
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GATCCTGGCCTKT
----TTGGCA---
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GATCCTGGCCTKT----
-----TGACCTTTNCNT
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GATCCTGGCCTKT----
--GYCTGGYYTNTGTCA
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A