Information for 3-TGTTTACHYW (Motif 2)

C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
Reverse Opposite:
G C A T C T G A C G T A C T A G A G C T G T C A T G C A C T G A A G T C G T C A
p-value:1e-60
log p-value:-1.399e+02
Information Content per bp:1.524
Number of Target Sequences with motif183.0
Percentage of Target Sequences with motif24.73%
Number of Background Sequences with motif2744.6
Percentage of Background Sequences with motif5.95%
Average Position of motif in Targets51.9 +/- 28.1bp
Average Position of motif in Background49.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TGTTTACHYW
TRTTTACTTW
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TGTTTACHYW
TGTTTACTTT
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:TGTTTACHYW
TGTTTACTTT
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.95
Offset:-3
Orientation:forward strand
Alignment:---TGTTTACHYW--
BSNTGTTTACWYWGN
 A C G T A C G T A C G T C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----TGTTTACHYW-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTACHYW
TTTGTTTACTTA
 A C G T A C G T C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:7
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TGTTTACHYW--
TGTTTACTTAGG
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--TGTTTACHYW
CNTGTTTACATA
 A C G T A C G T C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGTTTACHYW
TGTTTAC---
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
G A C T T C A G C G A T C A G T C A G T C T G A A G T C A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TGTTTACHYW
TGTTTATTT-
 C A G T T C A G G A C T A C G T C A G T T C G A G A T C G C A T G A C T C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T