Information for 6-SKGTCAACAGGTT (Motif 5)

A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
Reverse Opposite:
T C G A C G T A T A G C G T A C C G A T A C T G G A C T A C G T A T C G T C G A A G T C T G C A T A C G
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.713
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.96%
Number of Background Sequences with motif215.5
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets49.5 +/- 24.8bp
Average Position of motif in Background51.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:SKGTCAACAGGTT---
-GAGCAACAGGTGGTT
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:SKGTCAACAGGTT-
-ATGCAACAGGTGG
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:SKGTCAACAGGTT
--GTAAACAG---
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:SKGTCAACAGGTT
-TGTAAACAGGA-
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
A C G T C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-SKGTCAACAGGTT
SCTGTCARCACC--
 A C G T A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:SKGTCAACAGGTT
-NGTCAGCANTTT
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:SKGTCAACAGGTT
--GTCAGCANNTN
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-SKGTCAACAGGTT
TATGTAAACANG--
 A C G T A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.67
Offset:5
Orientation:forward strand
Alignment:SKGTCAACAGGTT-
-----AACAGGTGT
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SKGTCAACAGGTT
ATGTAAACADGS-
 A T G C A C G T T C A G A G C T A T G C C G T A C T G A A G T C C G T A A C T G A C T G G A C T A C G T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T