Information for 13-TGTGGGTATT (Motif 20)

A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A G C A T T G C A A T G C A G T C A G T C C G T A G T A C C G T A
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.872
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif81.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets43.4 +/- 27.1bp
Average Position of motif in Background49.1 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGGTATT
NNHTGTGGTTWN-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGTGGGTATT
GTCTGTGGTTT--
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTGGGTATT
GCTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TGTGGGTATT---
--TGTGGATTNNN
 A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTGGGTATT
TATGCGGGTA--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGGTATT
NNTGTGGTTT--
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTGGGTATT--
NNTGTGGATTSS
 A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGGGTATT-
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGGTATT
CTGTGGTTTN-
 A C G T A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTGGGTATT
-GTGGAT---
 A C G T A C T G A C G T A C T G A C T G A T C G A C G T C G T A A C G T A C G T
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T