Information for 6-GCACTCATGCTCCCAY (Motif 14)

A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
Reverse Opposite:
T C G A C A G T A T C G C A T G C T A G C G T A A C T G A G T C G T C A C G A T A C T G C T G A A C T G A G C T A T C G A G T C
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.687
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.4 +/- 18.4bp
Average Position of motif in Background45.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCACTCATGCTCCCAY
AGCCACTCAAG-------
 A C G T A C G T A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCACTCATGCTCCCAY
--------GCTCCG--
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCACTCATGCTCCCAY
--GCTCGGSCTC----
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCACTCATGCTCCCAY
AASCACTCAA--------
 A C G T A C G T A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCACTCATGCTCCCAY
----CNGTCCTCCC--
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCACTCATGCTCCCAY---
--ANNNATGATACCCCATC
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T A C G T A C G T A C G T
A C G T A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCACTCATGCTCCCAY
RSCACTYRAG-------
 A C G T A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCACTCATGCTCCCAY
-GKVTCADRTTWC---
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCACTCATGCTCCCAY---
--AATNTTGATACCCTATN
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCACTCATGCTCCCAY
ACATTCATGACACG--
 A C T G A T G C T C G A A G T C A G C T A G T C G C T A C A G T C T A G G T A C A C G T G A T C G A T C A T G C G T C A A G C T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T A C G T