Information for 7-ACWGCAAACACTT (Motif 6)

C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G G A T C C G A T A C T G C G A T
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.858
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 28.5bp
Average Position of motif in Background60.2 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.67
Offset:5
Orientation:forward strand
Alignment:ACWGCAAACACTT--
-----AAGCACTTAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ACWGCAAACACTT--
-----MRSCACTYAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ACWGCAAACACTT---
------ACCACTTGAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ACWGCAAACACTT--
------ACCACTTAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:forward strand
Alignment:ACWGCAAACACTT--
------ACCACTTAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACWGCAAACACTT
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.63
Offset:7
Orientation:forward strand
Alignment:ACWGCAAACACTT---
-------CCACTTGAA
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACWGCAAACACTT--
AGCGGCACACACGCAA
 A C G T C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACWGCAAACACTT
---GTAAACA---
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACWGCAAACACTT
---GTAAACA---
 C G T A A G T C C G A T C T A G G T A C C G T A G T C A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T