Information for 5-TAGGTAAATA (Motif 4)

A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A
Reverse Opposite:
A C G T C T G A G C A T A G C T C A G T C T G A A T G C G A T C G C A T T G C A
p-value:1e-17
log p-value:-3.956e+01
Information Content per bp:1.595
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif11.95%
Number of Background Sequences with motif2230.4
Percentage of Background Sequences with motif4.65%
Average Position of motif in Targets47.4 +/- 27.1bp
Average Position of motif in Background50.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TAGGTAAATA
WAAGTAAAYA
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXC1/MA0032.2/Jaspar

Match Rank:2
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TAGGTAAATA-
TATGTAAATAT
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TAGGTAAATA
AAAGTAAACA
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXB1/MA0845.1/Jaspar

Match Rank:4
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TAGGTAAATA-
TATGTAAATAT
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.87
Offset:0
Orientation:forward strand
Alignment:TAGGTAAATA
AAAGTAAACA
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTAAATA---
NCWRWGTAAACANSV
 A C G T A C G T A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TAGGTAAATA--
TAAGTAAACAAA
 A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TAGGTAAATA----
CAAAGTAAACANNNN
 A C G T A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTAAATA
NCTAAGTAAACA
 A C G T A C G T A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:10
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--TAGGTAAATA-----
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C G T A C T A G T A C G G A C T G T C A C T G A C G T A G A C T T G C A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C