Information for 5-GKYTGGGCHG (Motif 5)

C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
Reverse Opposite:
A G T C C G A T A C T G T A G C G A T C G T A C C G T A T C A G T G C A G T A C
p-value:1e-14
log p-value:-3.347e+01
Information Content per bp:1.534
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif10.58%
Number of Background Sequences with motif1922.9
Percentage of Background Sequences with motif4.12%
Average Position of motif in Targets48.9 +/- 27.9bp
Average Position of motif in Background50.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GKYTGGGCHG
WDNCTGGGCA-
 A C G T C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GKYTGGGCHG
-TNNGGGCAG
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GKYTGGGCHG-
--NTTGGCANN
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GKYTGGGCHG
-NGTGGGCAT
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GKYTGGGCHG
--CTTGGCAA
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GKYTGGGCHG
---TTGGCA-
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GKYTGGGCHG-
-NNTTGGCANN
 C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GKYTGGGCHG----
NNNNTTGGGCACNNCN
 A C G T A C G T C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GKYTGGGCHG
GGGGGCGGGGCC-
 A C G T A C G T A C G T C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GKYTGGGCHG
CGTGGGTGGTCC-
 A C G T A C G T A C G T C A T G A C G T A G T C G C A T A C T G C T A G A T C G T G A C G C T A T C A G
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T