Information for 12-ATTTGTAAGCCAT (Motif 16)

C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 29.7bp
Average Position of motif in Background39.2 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATTTGTAAGCCAT
-----TAATCCCN
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATTTGTAAGCCAT
-TTTGAAACCG--
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATTTGTAAGCCAT
----ATAATCCC-
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTAAGCCAT
NNNTTTNTAATACNG
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTAAGCCAT---
ACATCTGGWWTYAATTAR
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ATTTGTAAGCCAT
CTATAATTGTTAGCG--
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGTAAGCCAT---
TTNGGGTACGCCNNANN
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATTTGTAAGCCAT----
NTTGTTAATCCCTCTNN
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ATTTGTAAGCCAT
----TTAATCCC-
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

YY2/MA0748.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ATTTGTAAGCCAT--
----GTCCGCCATTA
 C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A