Information for 12-CCACACAGCCCGCACG (Motif 26)

G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
Reverse Opposite:
A G T C A T C G A C G T A T C G A G T C A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C T G G A C T C T A G A C T G
p-value:1e-3
log p-value:-8.749e+00
Information Content per bp:1.828
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.7 +/- 16.5bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCACACAGCCCGCACG
---CACAGN-------
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
CCACACAGCAGGAGA-
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
GAGCACAGCAGGACA-
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
CCACACAGCAGGAGA-
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACACAGCCCGCACG---
---AGCGGCACACACGCAA
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
---CACAGCAGGGGG-
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACACAGCCCGCACG
--DCTCAGCAGG----
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
-----CTGCCCGCA--
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCACACAGCCCGCACG
-----CAGCC------
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCACACAGCCCGCACG
GGACACACCCCC----
 G T A C A G T C C T G A A G T C C G T A A G T C C G T A A C T G A G T C T G A C A G T C C T A G A T G C C G T A A T G C C T A G
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T