Information for 10-CGCTKTGCGGGCMSCK (Motif 24)

A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
Reverse Opposite:
G T A C C T A G A T G C C A T G A C T G A G T C A T G C A G T C A C T G A G T C C G T A G T A C C T G A A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.387e+01
Information Content per bp:1.863
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 15.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CGCTKTGCGGGCMSCK
-----TNNGGGCAG--
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGCTKTGCGGGCMSCK
---TATGCGGGTA---
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCTKTGCGGGCMSCK
NNGCNCTGCGCGGC---
 A C G T A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCTKTGCGGGCMSCK
NNNNATGCGGGTNNNN
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCTKTGCGGGCMSCK
---CATGCGGGTAC--
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGCTKTGCGGGCMSCK
----TTGCGTGCVA--
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGCTKTGCGGGCMSCK
TGCCCTNAGGGCA---
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGCTKTGCGGGCMSCK
TGCCCTGAGGGCA---
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGCTKTGCGGGCMSCK
TGCCCTGAGGGCA---
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGCTKTGCGGGCMSCK
--BTKGGCGGGAAA--
 A G T C C T A G A G T C A G C T A C T G A C G T A C T G A G T C A C T G A T C G A C T G A G T C G T A C A T C G A G T C A C T G
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T