Information for 6-CGCTCCCTGA (Motif 9)

A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
Reverse Opposite:
A G C T A T G C T C G A A C T G A C T G C T A G C G T A A C T G T G A C C T A G
p-value:1e-10
log p-value:-2.444e+01
Information Content per bp:1.867
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif90.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets48.2 +/- 27.1bp
Average Position of motif in Background53.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGCTCCCTGA
-GCTCCG---
 A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCTCCCTGA
CACTTCCTGT
 A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCTCCCTGA---
ACATGCTACCTAATAC
 A C G T A C G T A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCTCCCTGA--
CGCCCCCTGACA
 A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGCTCCCTGA--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCTCCCTGA
CACTTCCTGT
 A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

Gabpa/MA0062.2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGCTCCCTGA
NCCACTTCCGG-
 A C G T A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T

KLF5/MA0599.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCTCCCTGA
GCCCCGCCCC--
 A C G T A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCTCCCTGA
CCACTTCCGGC
 A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCTCCCTGA
GTCACGCTCNCTGA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G A T A G T C A G T C A G T C A G C T A T C G C T G A
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A