Information for 6-AAGAAGCTAGACAGAC (Motif 29)

C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
Reverse Opposite:
A C T G A G C T A G T C A C G T A C T G A C G T A G T C A G C T C G T A A T C G A G T C A G C T A C G T A G T C A C G T C G A T
p-value:1e-3
log p-value:-8.720e+00
Information Content per bp:1.914
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 11.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC
-TGACANARRCCAGRC
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGAAGCTAGACAGAC
-AGGTGNCAGACAG--
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC--
-CAAATCCAGACATCACA
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AAGAAGCTAGACAGAC
------CCAGACAG--
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC
-------TTGACAGC-
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:AAGAAGCTAGACAGAC
------CCAGACRSVB
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AAGAAGCTAGACAGAC
-NGAAGC---------
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC
-------TTGACAGG-
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC
-AGGTGHCAGACA---
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAGAAGCTAGACAGAC
---CGTCTAGACA---
 C G T A C G T A A C T G C G T A C T G A A C T G A T G C A C G T C T G A A C T G C G T A A G T C C G T A A C T G C T G A A G T C
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T