Information for 16-TGMAGMAKGTTRC (Motif 28)

A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A C G T A A G T C G T C A A G C T A C T G A G T C A C G T A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.720e+00
Information Content per bp:1.870
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 21.5bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGMAGMAKGTTRC-----
RTTKCADNNKRTTGCATNAN
 A C G T A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T A C G T C A T G T A G C G C T A C A G T A G C T T G A C C A G T T C G A A G C T A C G T C A T G G T A C G T C A G C A T G C T A C G T A A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGMAGMAKGTTRC
ATGCAACAGGTGG-
 A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGMAGMAKGTTRC
-GKVTCADRTTWC
 A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

SCRT1/MA0743.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGMAGMAKGTTRC-
GAGCAACAGGTGGTT
 A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGMAGMAKGTTRC
NGAAGC-------
 A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGMAGMAKGTTRC
TTCTAGAACGTTC-
 A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGMAGMAKGTTRC
-GKMTCADRTTWC
 A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:TGMAGMAKGTTRC-----
------CTGTTGCTAGGS
 A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGMAGMAKGTTRC------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

SOX8/MA0868.1/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TGMAGMAKGTTRC
AACACTGCACATTGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A A C T G G T A C C T G A A C G T C T A G A C G T A C G T C T G A A G T C
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T A C G T