Information for 11-TCGCAGCTCA (Motif 22)

G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
Reverse Opposite:
C G A T A C T G C G T A A C T G A G T C A G C T A C T G G T A C T C A G C T G A
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.842
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif193.9
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets47.4 +/- 27.9bp
Average Position of motif in Background50.8 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCGCAGCTCA-
-CGCAGCTGCG
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGCAGCTCA
TGACACCT--
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGCAGCTCA
TCACACCT--
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCGCAGCTCA----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCGCAGCTCA--
--HCAGCTGDTN
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGCAGCTCA
-CACAGN---
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCGCAGCTCA
TTMACACCTT-
 A C G T G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCGCAGCTCA
---CAGCC--
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCGCAGCTCA-
NNGCAGCTGTC
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCGCAGCTCA
TCACACCT--
 G A C T A G T C A C T G A G T C C T G A C T A G A G T C C G A T A G T C G C T A
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T