Information for 2-AAAGGCGCCT (Motif 2)

T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T
Reverse Opposite:
C T G A C A T G C T A G A T G C T C A G A T G C G A T C A G C T A C G T A G C T
p-value:1e-16
log p-value:-3.822e+01
Information Content per bp:1.650
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif10.26%
Number of Background Sequences with motif1711.6
Percentage of Background Sequences with motif3.67%
Average Position of motif in Targets51.6 +/- 23.9bp
Average Position of motif in Background48.8 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F3/MA0469.2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAAGGCGCCT-----
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAGGCGCCT--
TTTGGCGCCAAA
 T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAGGCGCCT--
TAAGGCGTCTTG
 T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCT-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCT----
AAAATGGCGCCATTTT
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCT---
ATAAAGGCGCGCGAT
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAGGCGCCT
-AGCGCGCC-
 T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCT---
ATAAGGGCGCGCGAT
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCT-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGCGCCT
ACAAAGGNBCCT
 A C G T A C G T T C G A T G C A T C G A C T A G T A C G A G T C T A C G G A T C G T A C G A C T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T