Information for 8-CCCAGGCGGCCTG (Motif 17)

A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A G T C T A G C A C T G A T G C A G T C A C G T A C T G C T A G A T C G
p-value:1e-9
log p-value:-2.106e+01
Information Content per bp:1.897
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.9 +/- 35.5bp
Average Position of motif in Background47.7 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCAGGCGGCCTG
ATTTCCCAGVAKSCY--
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CCCAGGCGGCCTG-
------AGGCCTAG
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGGCGGCCTG
TGCCCAGNHW-----
 A C G T A C G T A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CCCAGGCGGCCTG-
------AGGCCTNG
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCCAGGCGGCCTG
-CCAGACRSVB--
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCAGGCGGCCTG
-CCAGACAG----
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCCAGGCGGCCTG
----GGCGCGCT-
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCCAGGCGGCCTG
GGGGCCGAGGCCTG
 A C G T A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCAGGCGGCCTG
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CCCAGGCGGCCTG--
-TCAGNGAGCGTGAC
 A T G C A G T C A G T C C G T A A C T G A T C G G T A C A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C