Information for 9-GCGGGATCAG (Motif 16)

A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
Reverse Opposite:
A G T C C G A T A C T G G T C A C A G T A T G C A T G C A G T C A C T G A T G C
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.833
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif187.8
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets51.7 +/- 18.4bp
Average Position of motif in Background46.5 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGGGATCAG
--NGGATTAN
 A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCAG
GGGCGGGACC--
 A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCAG
GGGCGGGAAGG-
 A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCAG-----
AGGGGGATTAGCTGCC
 A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGGGATCAG
GGCGGGAARN-
 A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGATCAG
TGGCGGGAAAHB
 A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCGGGATCAG
BTKGGCGGGAAA--
 A C G T A C G T A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATCAG
CWGGCGGGAA---
 A C G T A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGGGATCAG
GGGCGGGAAGG-
 A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGGATCAG---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A T C G G T A C C T A G A T C G A T C G G T C A C A G T A G T C G C T A C T A G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A