Information for 9-TTCAGAGCTT (Motif 6)

G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
Reverse Opposite:
C G T A C T G A T C A G G A T C A C G T A T G C C G A T T A C G G C T A C T G A
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.663
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif767.9
Percentage of Background Sequences with motif1.61%
Average Position of motif in Targets48.3 +/- 30.2bp
Average Position of motif in Background51.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGCTT
TTCACACCTT
 G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGAGCTT
CTTCACACCTA
 A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGAGCTT
NTTTTCACACCTT
 A C G T A C G T A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTCAGAGCTT---
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGCTT
TTMACACCTT
 G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGAGCTT
TTTCACACCT-
 A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGAGCTT
CTTGAGTGGCT
 A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGAGCTT---
GTATTGACAGCTNNTT
 A C G T A C G T A C G T G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGCTT
TTGAGTGSTT
 G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCAGAGCTT
TTAAGTGCTT
 G A C T C G A T A T G C G C T A T A C G T G C A C T A G A G T C G A C T G C A T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T