Information for 5-AGGCTCATGTTTCTTR (Motif 2)

C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
Reverse Opposite:
G A T C C G T A T C G A C A T G C G T A G C T A G C T A G T A C G T C A C A G T A T C G C G T A A C T G T G A C G T A C C G A T
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.683
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif31.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.3 +/- 28.4bp
Average Position of motif in Background42.7 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGCTCATGTTTCTTR
-GKVTCADRTTWC---
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR---
-----NNTTTTTCTTATNT
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR
---CAGCTGTTTCCT-
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T A C G T A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR
-GKMTCADRTTWC---
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR--
---NTNTTGTTGTTTGTN
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGGCTCATGTTTCTTR
-------TGTTTATTT
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR--
---CTCATGAATATTCAT
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G A C G T A C G T
A C G T A C G T A C G T T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGGCTCATGTTTCTTR
----TATTGTTTATT-
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGGCTCATGTTTCTTR
----GAATGTTTGTTT
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G
A C G T A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGGCTCATGTTTCTTR-----
-------TTTTTTTTCNNGTN
 C G T A A C T G A C T G A G T C G A C T A T G C G T C A A C G T A C T G C G A T C G A T A C G T G T A C A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A