Information for 12-TTTTATTTCAGAA (Motif 7)

A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
Reverse Opposite:
G A C T A C G T G T A C C G A T A C T G C T G A C G T A C G T A A G C T T C G A C G T A T C G A G T C A
p-value:1e-10
log p-value:-2.453e+01
Information Content per bp:1.768
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif42.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets62.2 +/- 26.1bp
Average Position of motif in Background55.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATTTCAGAA
TNAATTTTATTACCTN-
 A C G T A C G T A C G T A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCAGAA
NTTTTATGAC----
 A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCAGAA
NTTTTATTACN---
 A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTATTTCAGAA
TTTTATTGC----
 A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTATTTCAGAA
TTTTATGGCTN--
 A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCAGAA
TTTTTATTGC----
 A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTTTATTTCAGAA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCAGAA
NTTTTATTGG----
 A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTTTATTTCAGAA--
----ATTGCACAATA
 A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCAGAA
TTTTTTTTCNNGTN
 A C G T A C G T A G C T G A C T A G C T C T G A A C G T A C G T A G C T G T A C C G T A A C T G G T C A C G T A
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A