Information for 8-AGAGCGCCCYCCT (Motif 2)

C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
Reverse Opposite:
C G T A C T A G A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C G A C T A T G C A C G T
p-value:1e-20
log p-value:-4.661e+01
Information Content per bp:1.802
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.7 +/- 19.0bp
Average Position of motif in Background50.2 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGAGCGCCCYCCT
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGCGCCCYCCT
AGCGCGCC-----
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGCGCCCYCCT---
-NRGCCCCRCCCHBNN
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T A C G T A C G T A C G T
A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAGCGCCCYCCT--
---GCTCCGCCCMCY
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGAGCGCCCYCCT
----CCCCCCCC-
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGCGCCCYCCT
---GCCCCGCCCC
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAGCGCCCYCCT
---GCCCCACCCA
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGCGCCCYCCT---
GGTCCCGCCCCCTTCTC
 A C G T C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCGCCCYCCT
ANCGCGCGCCCTTNN
 A C G T A C G T C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGAGCGCCCYCCT
---GCTCCG----
 C G T A A T C G C G T A A C T G G T A C A C T G A G T C A G T C T G A C A G C T A G T C A G T C C G A T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T