Information for 9-GCTGAWCTGCART (Motif 4)

C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C A C G T A T C G A G T C C G T A A C T G G C A T A C G T A G T C C G T A A C T G G T A C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 32.5bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGAWCTGCART---
AATCGCACTGCATTCCG
 A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGAWCTGCART--------
--TGACCTAAAGTAACCTCTG
 C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGAWCTGCART---
----AGATGCAATCCC
 C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAWCTGCART
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGAWCTGCART-----
--TGACCTNTAGTAACCC
 C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAWCTGCART
AAAWWTGCTGACWWD----
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAWCTGCART
NCCTTATCTG----
 A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.53
Offset:-9
Orientation:reverse strand
Alignment:---------GCTGAWCTGCART
TGGCCANNNNNGGAACTGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAWCTGCART
NGCTN---------
 A C G T C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTGAWCTGCART
---GGTCTGGCAT
 C A T G A G T C C G A T A C T G C G T A C G T A G T A C A C G T A C T G A T G C C G T A C T A G A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T