Information for 4-GTGTGGCGCCGCC (Motif 3)

A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C
Reverse Opposite:
A C T G A C T G A T G C A C T G A T C G A G T C A C T G A T G C G T A C C T G A A G T C G C T A A T G C
p-value:1e-13
log p-value:-3.194e+01
Information Content per bp:1.814
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 17.4bp
Average Position of motif in Background63.4 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGCGCCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGCGCCGCC--
NNNNTTGGCGCCGANNN
 A C G T A C G T A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTGTGGCGCCGCC---
----GGCCCCGCCCCC
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGCGCCGCC--
NNNGGGGCGCCCCCNN
 A C G T A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GTGTGGCGCCGCC----
-----GCTCCGCCCMCY
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGTGGCGCCGCC-----
-GGTCCCGCCCCCTTCTC
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGTGGCGCCGCC
-TTTGGCGCCAAA
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTGTGGCGCCGCC----
---NAGCCCCGCCCCCN
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGTGGCGCCGCC----
--GCCCCGCCCCCTCCC
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GTGTGGCGCCGCC-----
---NRGCCCCRCCCHBNN
 A T C G C A G T A C T G G A C T A C T G A T C G A G T C A C T G A T G C A G T C A T C G G T A C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C