Information for 6-TGGAGTGAGAGGARGA (Motif 13)

A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
Reverse Opposite:
C G A T G A T C A G C T A C G T A G T C A G T C A C G T A T G C A G C T A T G C C G T A A G T C A G C T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.088e+01
Information Content per bp:1.819
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.9 +/- 28.8bp
Average Position of motif in Background58.8 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGAGAGGARGA
ATGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGAGAGGARGA
GTGGCGTGACNG-----
 A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGAGAGGARGA
GTGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGAGTGAGAGGARGA
ATGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGAGTGAGAGGARGA
-TGAGTGACAGSC---
 A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGAGTGAGAGGARGA
NTGATTGACAGN----
 A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGAGTGAGAGGARGA
-GGCGGGGGCGGGGG-
 A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGAGTGAGAGGARGA
BTGABTGACAGS----
 A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGAGTGAGAGGARGA
BTBRAGTGSN-------
 A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGAGTGAGAGGARGA---
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T A C T G A C T G C T G A A C T G A C G T A T C G C T G A A T C G C G T A C T A G A C T G G T C A C T G A C A T G C G T A A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A