Information for 9-AGCAAGATCA (Motif 11)

C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A
Reverse Opposite:
G A C T A C T G G T C A A G C T A G T C A G C T A G C T A T C G A T G C A G C T
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.839
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif50.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets47.8 +/- 31.6bp
Average Position of motif in Background48.4 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGCAAGATCA-
---AAGGTCAC
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCAAGATCA-
-TCAAGGTCAN
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGATCA-----
TATTCAAGGTCATGCGA
 A C G T A C G T C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCAAGATCA-
-TCAAGGTCAT
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCAAGATCA--
-TCAAGGTCATA
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGCAAGATCA--
--CAAGGHCANV
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAAGATCA
ATCAAGGTCA
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCAAGATCA-------
--AAAGATCAAAGGGTT
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCAAGATCA
BTCAAGGTCA
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCAAGATCA----
--AAAGATCAAAGG
 C T G A A T C G T A G C C T G A C T G A A C T G C T G A C A G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G