Information for 4-TGGRGTGAGAGGAAGA (Motif 3)

A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T C G A T A G T C A G T C A G C T A G T C A C G T A G T C C G T A A G T C A G C T A G T C A G T C G T C A
p-value:1e-13
log p-value:-3.122e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.8 +/- 18.1bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGRGTGAGAGGAAGA
GTGGCGTGACNG-----
 A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGRGTGAGAGGAAGA
GTGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGRGTGAGAGGAAGA
ATGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGRGTGAGAGGAAGA
ATGGGGTGAT-------
 A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TGGRGTGAGAGGAAGA
-------AGAGGAA--
 A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGGRGTGAGAGGAAGA-
-------AGAGGAAGTG
 A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

EGR1/MA0162.2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGRGTGAGAGGAAGA
-GGCGGGGGCGGGGG-
 A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGRGTGAGAGGAAGA---
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGRGTGAGAGGAAGA
AGGTGTGA--------
 A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGRGTGAGAGGAAGA
AGGGGTCAGAGGTCA-
 A C G T A C T G A C T G C T A G A C T G A C G T A C T G C G T A C T A G C T G A A C T G A C T G C G T A C T G A A C T G C T G A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T