Information for 11-TCTAGTTGAT (Motif 22)

A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C T G C T G A
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.1 +/- 19.7bp
Average Position of motif in Background56.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TCTAGTTGAT---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTAGTTGAT--
--TAATTGATTA
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTAGTTGAT----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTAGTTGAT
ACTAGTTAAC
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCTAGTTGAT
-CTAATCGNT
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTAGTTGAT
-CTAATTAA-
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

PAX7/MA0680.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTAGTTGAT--
--TAATCGATTA
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T
A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTAGTTGAT
-CTAATKGV-
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTAGTTGAT--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PAX3/MA0780.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTAGTTGAT--
--TAATCGATTA
 A G C T A G T C A C G T C G T A A C T G A C G T G C A T A C T G C G T A C G A T A C G T A C G T
A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A