Information for 8-AATTTTAAAA (Motif 9)

C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A
Reverse Opposite:
C G A T A C G T C G A T G C A T C G T A G T C A G C T A G C T A G A C T G C A T
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.595
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.43%
Number of Background Sequences with motif1912.2
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets46.8 +/- 30.1bp
Average Position of motif in Background49.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AATTTTAAAA
-NATTCAAAT
 C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAAA
CGGTTTCAAA-
 A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAAA----
CAATTGCAAAAATAT
 A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AATTTTAAAA--
AATATTAATAAAGA
 A C G T A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAAA---
AAATAAGAAAAAAC
 A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AATTTTAAAA-
-GTCGTAAAAA
 C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AATTTTAAAA--
-ATTGCACAATA
 C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAAAA-----
NANTTATATATAANGN
 A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATTTTAAAA--
CCGTATTATAAACAA
 A C G T A C G T A C G T C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATTTTAAAA-
-RTTATGYAAB
 C G T A C T G A C G A T C G A T C A G T G C A T C G T A G C T A C G T A G C T A A C G T
A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C