Information for 7-CTATGGGTAA (Motif 6)

A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
Reverse Opposite:
A G C T A G C T G T C A A G T C G T A C A T G C C G T A A C G T C G T A C T A G
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.796
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.4 +/- 30.4bp
Average Position of motif in Background50.1 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTATGGGTAA
GGAGGGGGAA
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTATGGGTAA
TTTTATKRGG--
 A C G T A C G T A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTATGGGTAA--
--AGGTGTGAAM
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTATGGGTAA
CTAATKGV--
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTATGGGTAA----
TTAAGAGGAAGTTA
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A A C G T A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTATGGGTAA--
-TAGGTGTGAAG
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A A C G T A C G T
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

NKX3-2/MA0122.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTATGGGTAA
TTAAGTGGN-
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTATGGGTAA
NNATAAGGNN--
 A C G T A C G T A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTATGGGTAA-------
-TATTGGTAATTACCTT
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTATGGGTAA
--AGGTGTGA
 A G T C A C G T C G T A C G A T A T C G A C T G A C T G A C G T T C G A C T G A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A