Information for 6-TTTAATTTTTKAA (Motif 3)

A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
Reverse Opposite:
C G A T C A G T G T A C C G T A C T G A C G T A C T G A C G T A C A G T G C A T G C T A C G T A G T C A
p-value:1e-13
log p-value:-3.199e+01
Information Content per bp:1.670
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif453.4
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets49.6 +/- 29.4bp
Average Position of motif in Background46.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTAATTTTTKAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTAATTTTTKAA-
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTAATTTTTKAA
AGTTTCAKTTTC---
 A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTAATTTTTKAA
TGTTTACTTT-----
 A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTAATTTTTKAA
ACTTTCGTTTCT---
 A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TTTAATTTTTKAA
NNNTTTGTTTACATTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTAATTTTTKAA
RSTTTCRSTTTC---
 A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTAATTTTTKAA
TGTTTACTTT-----
 A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTAATTTTTKAA
TTTTTATTGC----
 A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTAATTTTTKAA
CTTTGTTTACTTTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A G C A T A G C T A C G T G A C T G C A T C A T G G T C A G C T A
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G A C G T A C G T A C G T