Information for 5-GCCATCTCCT (Motif 3)

T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T
Reverse Opposite:
T G C A C T A G A C T G C G T A C T A G G T C A A C G T C T A G A T C G A G T C
p-value:1e-15
log p-value:-3.572e+01
Information Content per bp:1.850
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif164.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets53.6 +/- 21.4bp
Average Position of motif in Background47.6 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCCATCTCCT
GCCATCTGTT
 T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCATCTCCT
ACCATCTGTT
 T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCATCTCCT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCATCTCCT--
ACCACATCCTGT
 T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTCCT-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTCCT
GCNGCCATCTTG-
 A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GCCATCTCCT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCATCTCCT
GCCGCCATCTTG-
 A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCATCTCCT---
---ATTTCCTGTN
 T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTCCT---
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T T C A G A T G C A G T C G T C A A C G T A G T C A C G T T G A C A G T C A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T