p-value: | 1e-8 |
log p-value: | -1.904e+01 |
Information Content per bp: | 1.675 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.46% |
Number of Background Sequences with motif | 438.6 |
Percentage of Background Sequences with motif | 0.92% |
Average Position of motif in Targets | 53.5 +/- 32.4bp |
Average Position of motif in Background | 49.6 +/- 29.2bp |
Strand Bias (log2 ratio + to - strand density) | 1.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATTGACATT CTCATTTGCATW |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CATTGACATT BTVATTWGCATA |
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Nr2e1/MA0676.1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CATTGACATT- --TTGACTTTT |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATTGACATT- TAATTTGCATAA |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CATTGACATT -ATTTGCATA |
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FOXB1/MA0845.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATTGACATT ATATTTACATA |
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POU3F2/MA0787.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATTGACATT- TAATTTGCATAA |
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POU3F4/MA0789.1/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CATTGACATT -ATTTGCATA |
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POU2F2/MA0507.1/Jaspar
Match Rank: | 9 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATTGACATT- TTCATTTGCATAT |
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PB0169.1_Sox15_2/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CATTGACATT--- TTGAATGAAATTCGA |
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